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PWM and counter

While using RA2L1AB3CFL processor. I want to produce PWM and Counter at the same time on this processor. I need to both keep time and create PWM. In the FSP configuration section, the PWM and counter settings are different. So I open two of the r_gpt stacks. Although I open it, I cannot set it in different properties. Can anyone help me how can I do this? PWM and counter need to run continuously. Unfortunately, it is not open and closed.

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